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Slot: has_physical_state

The slot to specify the physical state of a MaterialEntity.

URI: SIO:000008 Alias: has_physical_state

Applicable Classes

Name Description Modifies Slot
Catalyst A ChemicalSubstance or MaterialEntity that initiates or accelerates a ChemicalReaction without itself being affected. no
Reagent A ChemicalSubstance that is consumed or transformed in a ChemicalReaction. no
StartingMaterial A ChemicalSubstance with that has a starting material role in a synthesis. no
ChemicalProduct A chemical substance that is produced by a ChemicalReaction. no
MaterialisticMixin A LinkML mixin used to pass down properties common to all material entities. It is needed for example to have MaterialSample have the same properties as MaterialEntity, although it is defined as a subclass of EvaluatedEntity. no
ChemicalSubstanceMixin A LinkML mixin used to pass down properties common to all material entities that are described in a chemical context via being composed of chemical entities (e.g. atom, molecule, ion, ion pair, radical, complex, conformer etc., ) of the same type or of different types. no
MaterialEntity A material is an Entity that has some portion of matter as proper part. no
DissolvingSubstance A liquid ChemicalSubstance that dissolves or that is capable of dissolving a ChemicalSubstance. no
PolymerMixin A LinkML mixin used to pass down properties common to all chemical substances that are composed of macromolecules of different kinds and which may be differentiated by composition, length, degree of branching etc.. no
MaterialSample A Sample that was derived from a previous MaterialSample or some other kind of MaterialEntity. no
Reactor A reactor is a container for controlling a biological or chemical reaction or process. no
PolymerSample A SubstanceSample derived from a Polymer. no
SubstanceSample A MaterialSample derived from a chemical substance that is of interest in an analytical procedure. no
CatalystSample A MaterialSample that is the product of a catalyst Synthesis.
The specific type of catalyst (e.g. heterogeneous, supported metal)
is expressed via rdf_type using a voc4cat term.		 no
Precursor A MaterialSample that serves as input material in a catalyst Synthesis.
Precursors are consumed or transformed during the preparation process.		 no

Properties

TODOs

  • Find out how to make this a subproperty of has_qualitative_attribute, as it currently throws the error 'physical_state enumerations cannot be inlined' due to the fact that we are using an enum here.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/nfdi4cat/coremeta4cat

Mappings

Mapping Type Mapped Value
self SIO:000008
native coremeta4cat:has_physical_state

LinkML Source

name: has_physical_state
description: The slot to specify the physical state of a MaterialEntity.
todos:
- Find out how to make this a subproperty of has_qualitative_attribute, as it currently
  throws the error 'physical_state enumerations cannot be inlined' due to the fact
  that we are using an enum here.
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
rank: 1000
slot_uri: SIO:000008
alias: has_physical_state
domain_of:
- MaterialisticMixin
range: PhysicalStateEnum
multivalued: false
inlined: false