Class: ChromatographyMixin

Mixin providing chromatographic separation parameters shared by

separation techniques (GCMS, SizeExclusionChromatography, HPLC_MS).

URI: coremeta4cat:class/ChromatographyMixin

 classDiagram
    class ChromatographyMixin
    click ChromatographyMixin href "../../classes/ChromatographyMixin/"
      ChromatographyMixin <|-- GCMS
        click GCMS href "../../classes/GCMS/"
      ChromatographyMixin <|-- SizeExclusionChromatography
        click SizeExclusionChromatography href "../../classes/SizeExclusionChromatography/"
      ChromatographyMixin <|-- HighPerformanceLiquidChromatographyMassSpectrometry
        click HighPerformanceLiquidChromatographyMassSpectrometry href "../../classes/HighPerformanceLiquidChromatographyMassSpectrometry/"

      ChromatographyMixin : column_type

      ChromatographyMixin : eluent





        ChromatographyMixin --> "*" ChemicalEntity : eluent
        click ChemicalEntity href "../../classes/ChemicalEntity/"



      ChromatographyMixin : external_standard

      ChromatographyMixin : has_flow_rate





        ChromatographyMixin --> "* _recommended_" VolumeFlowRate : has_flow_rate
        click VolumeFlowRate href "../../classes/VolumeFlowRate/"



      ChromatographyMixin : has_injection_volume





        ChromatographyMixin --> "* _recommended_" Volume : has_injection_volume
        click Volume href "../../classes/Volume/"



      ChromatographyMixin : internal_standard

Slots

Name	Cardinality and Range	Description	Inheritance
column_type	* String	Type of chromatographic column used.	direct
eluent	* ChemicalEntity	Eluent or mobile phase used in chromatography.	direct
has_flow_rate	* recommended VolumeFlowRate	Volumetric flow rate of a gas or liquid.	direct
has_injection_volume	* recommended Volume	Volume injected in a chromatographic or mass spectrometric analysis.	direct
external_standard	* String	External standard used for quantification or calibration.	direct
internal_standard	* String	Internal standard used for quantification or calibration.	direct

Mixin Usage

mixed into	description
GCMS	Gas chromatography-mass spectrometry for volatile compound identification and quantification.
SizeExclusionChromatography	Size exclusion chromatography for molecular weight distribution determination.
HighPerformanceLiquidChromatographyMassSpectrometry	High-performance liquid chromatography-mass spectrometry for compound identification and quantification.

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/nfdi4cat/coremeta4cat

Mappings

Mapping Type	Mapped Value
self	coremeta4cat:ChromatographyMixin
native	coremeta4cat:ChromatographyMixin

LinkML Source

Direct

name: ChromatographyMixin
description: 'Mixin providing chromatographic separation parameters shared by

  separation techniques (GCMS, SizeExclusionChromatography, HPLC_MS).'
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
mixin: true
slots:
- column_type
- eluent
- has_flow_rate
- has_injection_volume
- external_standard
- internal_standard

Induced

name: ChromatographyMixin
description: 'Mixin providing chromatographic separation parameters shared by

  separation techniques (GCMS, SizeExclusionChromatography, HPLC_MS).'
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
mixin: true
attributes:
  column_type:
    name: column_type
    description: Type of chromatographic column used.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:column_type
    alias: column_type
    owner: ChromatographyMixin
    domain_of:
    - ChromatographyMixin
    range: string
    multivalued: true
  eluent:
    name: eluent
    description: Eluent or mobile phase used in chromatography.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: AFRL:0000011
    alias: eluent
    owner: ChromatographyMixin
    domain_of:
    - ChromatographyMixin
    range: ChemicalEntity
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_flow_rate:
    name: has_flow_rate
    description: Volumetric flow rate of a gas or liquid.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    is_a: has_quantitative_attribute
    slot_uri: SIO:000008
    alias: has_flow_rate
    owner: ChromatographyMixin
    domain_of:
    - FlameSprayPyrolysis
    - ChromatographyMixin
    - DRIFTS
    - ElectroSprayIonizationMassSpectrometry
    range: VolumeFlowRate
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_injection_volume:
    name: has_injection_volume
    description: Volume injected in a chromatographic or mass spectrometric analysis.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    is_a: has_volume
    slot_uri: SIO:000008
    alias: has_injection_volume
    owner: ChromatographyMixin
    domain_of:
    - ChromatographyMixin
    range: Volume
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  external_standard:
    name: external_standard
    description: External standard used for quantification or calibration.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:external_standard
    alias: external_standard
    owner: ChromatographyMixin
    domain_of:
    - ChromatographyMixin
    range: string
    multivalued: true
  internal_standard:
    name: internal_standard
    description: Internal standard used for quantification or calibration.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:internal_standard
    alias: internal_standard
    owner: ChromatographyMixin
    domain_of:
    - ChromatographyMixin
    range: string
    multivalued: true