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Class: Synthesis

A DataGeneratingActivity in which a catalyst is prepared.

__

The preparation protocol is linked via realized_plan using a

PreparationMethod instance. Input materials (Precursors) are linked via

had_input_entity. The resulting catalyst (CatalystSample) is linked via

had_output_entity.

__

The type of synthesis is further specified via rdf_type using an ontology

term (e.g. a voc4cat preparation method term), following DCAT-AP-PLUS

Pattern 3.

URI: OBI:0000070

 classDiagram
    class Synthesis
    click Synthesis href "../../classes/Synthesis/"
      DataGeneratingActivity <|-- Synthesis
        click DataGeneratingActivity href "../../classes/DataGeneratingActivity/"

      Synthesis : carried_out_by





        Synthesis --> "* _recommended_" AgenticEntity : carried_out_by
        click AgenticEntity href "../../classes/AgenticEntity/"



      Synthesis : catalyst_measured_properties

      Synthesis : description

      Synthesis : evaluated_activity





        Synthesis --> "* _recommended_" EvaluatedActivity : evaluated_activity
        click EvaluatedActivity href "../../classes/EvaluatedActivity/"



      Synthesis : evaluated_entity





        Synthesis --> "* _recommended_" EvaluatedEntity : evaluated_entity
        click EvaluatedEntity href "../../classes/EvaluatedEntity/"



      Synthesis : had_input_activity





        Synthesis --> "* _recommended_" Activity : had_input_activity
        click Activity href "../../classes/Activity/"



      Synthesis : had_input_entity





        Synthesis --> "1..* _recommended_" Precursor : had_input_entity
        click Precursor href "../../classes/Precursor/"



      Synthesis : had_output_entity





        Synthesis --> "* _recommended_" CatalystSample : had_output_entity
        click CatalystSample href "../../classes/CatalystSample/"



      Synthesis : has_part





        Synthesis --> "*" Activity : has_part
        click Activity href "../../classes/Activity/"



      Synthesis : has_qualitative_attribute





        Synthesis --> "* _recommended_" QualitativeAttribute : has_qualitative_attribute
        click QualitativeAttribute href "../../classes/QualitativeAttribute/"



      Synthesis : has_quantitative_attribute





        Synthesis --> "* _recommended_" QuantitativeAttribute : has_quantitative_attribute
        click QuantitativeAttribute href "../../classes/QuantitativeAttribute/"



      Synthesis : id

      Synthesis : nominal_composition

      Synthesis : occurred_in





        Synthesis --> "0..1" Surrounding : occurred_in
        click Surrounding href "../../classes/Surrounding/"



      Synthesis : other_identifier





        Synthesis --> "*" Identifier : other_identifier
        click Identifier href "../../classes/Identifier/"



      Synthesis : part_of





        Synthesis --> "*" Activity : part_of
        click Activity href "../../classes/Activity/"



      Synthesis : rdf_type





        Synthesis --> "0..1 _recommended_" DefinedTerm : rdf_type
        click DefinedTerm href "../../classes/DefinedTerm/"



      Synthesis : realized_plan





        Synthesis --> "1" PreparationMethod : realized_plan
        click PreparationMethod href "../../classes/PreparationMethod/"



      Synthesis : sample_pretreatment

      Synthesis : solvent

      Synthesis : storage_conditions

      Synthesis : support

      Synthesis : title

      Synthesis : type





        Synthesis --> "0..1" DefinedTerm : type
        click DefinedTerm href "../../classes/DefinedTerm/"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
nominal_composition 1..*
String		 Nominal elemental or chemical composition of the catalyst (e.g. 5wt% Pt/Al2O3). direct
catalyst_measured_properties 1..*
String		 Key measured properties of the resulting catalyst
(e.g. BET surface area, sieve fraction, molar ratio).		 direct
storage_conditions * recommended
String
 Conditions under which the catalyst is stored (e.g. inert atmosphere, 4°C). direct
support *
String		 Support material on which the active phase is deposited (e.g. Al2O3, SiO2). direct
solvent *
String		 Solvent used in a process or sample preparation. direct
sample_pretreatment *
String		 Pre-treatment applied to the sample before a process or measurement. direct
evaluated_entity * recommended
EvaluatedEntity		 The slot to specify the Entity about which the DataGeneratingActivity produced information. DataGeneratingActivity
evaluated_activity * recommended
EvaluatedActivity		 The slot to specify the Activity about which the DataGeneratingActivity produced information. DataGeneratingActivity
realized_plan 1
PreparationMethod		 The PreparationMethod (protocol) realized in this Synthesis. DataGeneratingActivity
occurred_in 0..1
Surrounding		 The slot to specify the Surrounding in which an Activity took place. DataGeneratingActivity
id 1
Uriorcurie		 A slot to provide an URI for an entity within this schema. Activity
title *
String		 The slot to provide a title for the Activity. Activity
description *
String		 The slot to provide a description for the Activity. Activity
other_identifier *
Identifier		 The slot to provide a secondary identifier of the Activity. Activity
has_part *
Activity		 The slot to provide an Activity that is part of the Activity. Activity
had_input_entity 1..* recommended
Precursor		 The Precursor(s) consumed during this Synthesis. Activity
had_output_entity * recommended
CatalystSample		 The CatalystSample produced by this Synthesis. Activity
had_input_activity * recommended
Activity		 The slot to provide a previous Activity that informed the Activity by being causally via a shared participant. Activity
carried_out_by * recommended
AgenticEntity		 The slot to specify the AgenticEntity that played a certain part in carrying out the Activity, either via having a specific role, function or disposition that was realized in the Activity. Activity
has_qualitative_attribute * recommended
QualitativeAttribute		 The slot to relate a qualitative attribute to an EvaluatedEntity, EvaluatedActivity or AgenticEntity Activity
has_quantitative_attribute * recommended
QuantitativeAttribute		 The slot to relate a quantitative attribute to an EvaluatedEntity, EvaluatedActivity or AgenticEntity Activity
part_of *
Activity		 The slot to provide an Activity of which the Activity is a part. Activity
type 0..1
DefinedTerm		 This slot is described in more detail within the class in which it is used. ClassifierMixin
rdf_type 0..1 recommended
DefinedTerm		 The slot to specify the ontology class that is instantiated by an entity. ClassifierMixin

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/nfdi4cat/coremeta4cat

Mappings

Mapping Type Mapped Value
self OBI:0000070
native coremeta4cat:Synthesis

LinkML Source

Direct

name: Synthesis
description: 'A DataGeneratingActivity in which a catalyst is prepared.


  The preparation protocol is linked via realized_plan using a

  PreparationMethod instance. Input materials (Precursors) are linked via

  had_input_entity. The resulting catalyst (CatalystSample) is linked via

  had_output_entity.


  The type of synthesis is further specified via rdf_type using an ontology

  term (e.g. a voc4cat preparation method term), following DCAT-AP-PLUS

  Pattern 3.'
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
is_a: DataGeneratingActivity
slots:
- nominal_composition
- catalyst_measured_properties
- storage_conditions
- support
- solvent
- sample_pretreatment
slot_usage:
  nominal_composition:
    name: nominal_composition
    required: true
  catalyst_measured_properties:
    name: catalyst_measured_properties
    required: true
  had_input_entity:
    name: had_input_entity
    description: The Precursor(s) consumed during this Synthesis.
    range: Precursor
    required: true
    multivalued: true
    inlined_as_list: true
  had_output_entity:
    name: had_output_entity
    description: The CatalystSample produced by this Synthesis.
    range: CatalystSample
    recommended: true
    multivalued: true
    inlined_as_list: true
  realized_plan:
    name: realized_plan
    description: The PreparationMethod (protocol) realized in this Synthesis.
    range: PreparationMethod
    required: true
  storage_conditions:
    name: storage_conditions
    recommended: true
class_uri: OBI:0000070

Induced

name: Synthesis
description: 'A DataGeneratingActivity in which a catalyst is prepared.


  The preparation protocol is linked via realized_plan using a

  PreparationMethod instance. Input materials (Precursors) are linked via

  had_input_entity. The resulting catalyst (CatalystSample) is linked via

  had_output_entity.


  The type of synthesis is further specified via rdf_type using an ontology

  term (e.g. a voc4cat preparation method term), following DCAT-AP-PLUS

  Pattern 3.'
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
is_a: DataGeneratingActivity
slot_usage:
  nominal_composition:
    name: nominal_composition
    required: true
  catalyst_measured_properties:
    name: catalyst_measured_properties
    required: true
  had_input_entity:
    name: had_input_entity
    description: The Precursor(s) consumed during this Synthesis.
    range: Precursor
    required: true
    multivalued: true
    inlined_as_list: true
  had_output_entity:
    name: had_output_entity
    description: The CatalystSample produced by this Synthesis.
    range: CatalystSample
    recommended: true
    multivalued: true
    inlined_as_list: true
  realized_plan:
    name: realized_plan
    description: The PreparationMethod (protocol) realized in this Synthesis.
    range: PreparationMethod
    required: true
  storage_conditions:
    name: storage_conditions
    recommended: true
attributes:
  nominal_composition:
    name: nominal_composition
    description: Nominal elemental or chemical composition of the catalyst (e.g. 5wt%
      Pt/Al2O3).
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:nominal_composition
    alias: nominal_composition
    owner: Synthesis
    domain_of:
    - Synthesis
    range: string
    required: true
    multivalued: true
  catalyst_measured_properties:
    name: catalyst_measured_properties
    description: 'Key measured properties of the resulting catalyst

      (e.g. BET surface area, sieve fraction, molar ratio).'
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:catalyst_measured_properties
    alias: catalyst_measured_properties
    owner: Synthesis
    domain_of:
    - Synthesis
    range: string
    required: true
    multivalued: true
  storage_conditions:
    name: storage_conditions
    description: Conditions under which the catalyst is stored (e.g. inert atmosphere,
      4°C).
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:storage_conditions
    alias: storage_conditions
    owner: Synthesis
    domain_of:
    - Synthesis
    range: string
    recommended: true
    multivalued: true
  support:
    name: support
    description: Support material on which the active phase is deposited (e.g. Al2O3,
      SiO2).
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: coremeta4cat:support
    alias: support
    owner: Synthesis
    domain_of:
    - Synthesis
    range: string
    multivalued: true
  solvent:
    name: solvent
    description: Solvent used in a process or sample preparation.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: VOC4CAT:0007246
    alias: solvent
    owner: Synthesis
    domain_of:
    - Synthesis
    - NMRSpectroscopy
    - UVVisSpectroscopy
    - DynamicLightScattering
    range: string
    multivalued: true
  sample_pretreatment:
    name: sample_pretreatment
    description: Pre-treatment applied to the sample before a process or measurement.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: VOC4CAT:0000122
    alias: sample_pretreatment
    owner: Synthesis
    domain_of:
    - Synthesis
    - Characterization
    range: string
    multivalued: true
  evaluated_entity:
    name: evaluated_entity
    description: The slot to specify the Entity about which the DataGeneratingActivity
      produced information.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    is_a: had_input_entity
    slot_uri: prov:used
    alias: evaluated_entity
    owner: Synthesis
    domain_of:
    - DataGeneratingActivity
    range: EvaluatedEntity
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  evaluated_activity:
    name: evaluated_activity
    description: The slot to specify the Activity about which the DataGeneratingActivity
      produced information.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    is_a: had_input_activity
    slot_uri: prov:wasInformedBy
    alias: evaluated_activity
    owner: Synthesis
    domain_of:
    - DataGeneratingActivity
    range: EvaluatedActivity
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  realized_plan:
    name: realized_plan
    description: The PreparationMethod (protocol) realized in this Synthesis.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: prov:used
    alias: realized_plan
    owner: Synthesis
    domain_of:
    - DataGeneratingActivity
    range: PreparationMethod
    required: true
  occurred_in:
    name: occurred_in
    description: The slot to specify the Surrounding in which an Activity took place.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: prov:atLocation
    alias: occurred_in
    owner: Synthesis
    domain_of:
    - DataGeneratingActivity
    range: Surrounding
  id:
    name: id
    description: A slot to provide an URI for an entity within this schema.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    identifier: true
    alias: id
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Dataset
    - DefinedTerm
    - Document
    - Entity
    - LegalResource
    - LicenseDocument
    - Resource
    range: uriorcurie
    required: true
  title:
    name: title
    description: The slot to provide a title for the Activity.
    notes:
    - not in DCAT-AP
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Any
    - Attribution
    - Catalogue
    - CatalogueRecord
    - ChecksumAlgorithm
    - Concept
    - ConceptScheme
    - DataService
    - Dataset
    - DatasetSeries
    - DefinedTerm
    - Distribution
    - Document
    - Entity
    - Frequency
    - Geometry
    - Identifier
    - LegalResource
    - LicenseDocument
    - LinguisticSystem
    - MediaType
    - MediaTypeOrExtent
    - PeriodOfTime
    - Plan
    - Policy
    - ProvenanceStatement
    - QualitativeAttribute
    - QuantitativeAttribute
    - Resource
    - RightsStatement
    - Role
    - Standard
    - SupportiveEntity
    - Surrounding
    - TimeInstant
    range: string
    multivalued: true
    inlined_as_list: true
  description:
    name: description
    description: The slot to provide a description for the Activity.
    notes:
    - not in DCAT-AP
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:description
    alias: description
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Any
    - Attribution
    - Catalogue
    - CatalogueRecord
    - ChecksumAlgorithm
    - Concept
    - ConceptScheme
    - DataService
    - Dataset
    - DatasetSeries
    - Distribution
    - Document
    - Entity
    - Frequency
    - Geometry
    - Identifier
    - LegalResource
    - LicenseDocument
    - LinguisticSystem
    - MediaType
    - MediaTypeOrExtent
    - PeriodOfTime
    - Plan
    - Policy
    - ProvenanceStatement
    - QualitativeAttribute
    - QuantitativeAttribute
    - Resource
    - RightsStatement
    - Role
    - Standard
    - SupportiveEntity
    - Surrounding
    - TimeInstant
    range: string
    multivalued: true
    inlined_as_list: true
  other_identifier:
    name: other_identifier
    description: The slot to provide a secondary identifier of the Activity.
    notes:
    - not in DCAT-AP
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: adms:identifier
    alias: other_identifier
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Dataset
    - Entity
    range: Identifier
    multivalued: true
    inlined_as_list: true
  has_part:
    name: has_part
    description: The slot to provide an Activity that is part of the Activity.
    notes:
    - not in DCAT-AP
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:hasPart
    alias: has_part
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Catalogue
    - Entity
    range: Activity
    multivalued: true
    inlined_as_list: true
  had_input_entity:
    name: had_input_entity
    description: The Precursor(s) consumed during this Synthesis.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: prov:used
    alias: had_input_entity
    owner: Synthesis
    domain_of:
    - Activity
    range: Precursor
    required: true
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  had_output_entity:
    name: had_output_entity
    description: The CatalystSample produced by this Synthesis.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: prov:generated
    alias: had_output_entity
    owner: Synthesis
    domain_of:
    - Activity
    range: CatalystSample
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  had_input_activity:
    name: had_input_activity
    description: The slot to provide a previous Activity that informed the Activity
      by being causally via a shared participant.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: prov:wasInformedBy
    alias: had_input_activity
    owner: Synthesis
    domain_of:
    - Activity
    range: Activity
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  carried_out_by:
    name: carried_out_by
    description: The slot to specify the AgenticEntity that played a certain part
      in carrying out the Activity, either via having a specific role, function or
      disposition that was realized in the Activity.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: prov:wasAssociatedWith
    alias: carried_out_by
    owner: Synthesis
    domain_of:
    - Activity
    range: AgenticEntity
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_qualitative_attribute:
    name: has_qualitative_attribute
    description: The slot to relate a qualitative attribute to an EvaluatedEntity,
      EvaluatedActivity or AgenticEntity
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:relation
    alias: has_qualitative_attribute
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    range: QualitativeAttribute
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_quantitative_attribute:
    name: has_quantitative_attribute
    description: The slot to relate a quantitative attribute to an EvaluatedEntity,
      EvaluatedActivity or AgenticEntity
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:relation
    alias: has_quantitative_attribute
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    range: QuantitativeAttribute
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  part_of:
    name: part_of
    description: The slot to provide an Activity of which the Activity is a part.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:isPartOf
    alias: part_of
    owner: Synthesis
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    inverse: has_part
    range: Activity
    multivalued: true
    inlined_as_list: true
  type:
    name: type
    description: This slot is described in more detail within the class in which it
      is used.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:type
    alias: type
    owner: Synthesis
    domain_of:
    - Agent
    - ClassifierMixin
    - Dataset
    - LicenseDocument
    range: DefinedTerm
    inlined: true
  rdf_type:
    name: rdf_type
    description: The slot to specify the ontology class that is instantiated by an
      entity.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: rdf:type
    alias: rdf_type
    owner: Synthesis
    domain_of:
    - ClassifierMixin
    range: DefinedTerm
    recommended: true
    inlined: true
class_uri: OBI:0000070