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Class: Atom

An Entity constituting the smallest component of a chemical element having the chemical properties of the element.

URI: CHEBI:33250

 classDiagram
    class Atom
    click Atom href "../../classes/Atom/"
      Entity <|-- Atom
        click Entity href "../../classes/Entity/"

      Atom : description

      Atom : has_part





        Atom --> "*" Entity : has_part
        click Entity href "../../classes/Entity/"



      Atom : has_qualitative_attribute





        Atom --> "* _recommended_" QualitativeAttribute : has_qualitative_attribute
        click QualitativeAttribute href "../../classes/QualitativeAttribute/"



      Atom : has_quantitative_attribute





        Atom --> "* _recommended_" QuantitativeAttribute : has_quantitative_attribute
        click QuantitativeAttribute href "../../classes/QuantitativeAttribute/"



      Atom : id

      Atom : other_identifier





        Atom --> "*" Identifier : other_identifier
        click Identifier href "../../classes/Identifier/"



      Atom : part_of





        Atom --> "*" Entity : part_of
        click Entity href "../../classes/Entity/"



      Atom : rdf_type





        Atom --> "1 _recommended_" DefinedTerm : rdf_type
        click DefinedTerm href "../../classes/DefinedTerm/"



      Atom : title

      Atom : type





        Atom --> "0..1" DefinedTerm : type
        click DefinedTerm href "../../classes/DefinedTerm/"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
title 0..1
String		 The slot to provide a title for the Entity. Entity
description 0..1
String		 The slot to provide a description for the Entity. Entity
id 1
Uriorcurie		 A slot to provide an URI for an entity within this schema. Entity
other_identifier *
Identifier		 A slot to provide a secondary identifier of the Entity. Entity
has_qualitative_attribute * recommended
QualitativeAttribute		 The slot to relate a qualitative attribute to an EvaluatedEntity, EvaluatedActivity or AgenticEntity Entity
has_quantitative_attribute * recommended
QuantitativeAttribute		 The slot to relate a quantitative attribute to an EvaluatedEntity, EvaluatedActivity or AgenticEntity Entity
has_part *
Entity		 A slot to provide a part of the Entity. Entity
part_of *
Entity		 The slot to specify an Entity of which the Entity is a part. Entity
type 0..1
DefinedTerm		 This slot is described in more detail within the class in which it is used. ClassifierMixin
rdf_type 1 recommended
DefinedTerm		 The slot to provide the Atom as a ChEBI ID from the atom (CHEBI:33250) branch. ClassifierMixin

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/nfdi4cat/coremeta4cat

Mappings

Mapping Type Mapped Value
self CHEBI:33250
native coremeta4cat:Atom

LinkML Source

Direct

name: Atom
description: An Entity constituting the smallest component of a chemical element having
  the chemical properties of the element.
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
is_a: Entity
slot_usage:
  rdf_type:
    name: rdf_type
    description: The slot to provide the Atom as a ChEBI ID from the atom (CHEBI:33250)
      branch.
    required: true
class_uri: CHEBI:33250

Induced

name: Atom
description: An Entity constituting the smallest component of a chemical element having
  the chemical properties of the element.
from_schema: https://w3id.org/nfdi4cat/coremeta4cat
is_a: Entity
slot_usage:
  rdf_type:
    name: rdf_type
    description: The slot to provide the Atom as a ChEBI ID from the atom (CHEBI:33250)
      branch.
    required: true
attributes:
  title:
    name: title
    description: The slot to provide a title for the Entity.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Any
    - Attribution
    - Catalogue
    - CatalogueRecord
    - ChecksumAlgorithm
    - Concept
    - ConceptScheme
    - DataService
    - Dataset
    - DatasetSeries
    - DefinedTerm
    - Distribution
    - Document
    - Entity
    - Frequency
    - Geometry
    - Identifier
    - LegalResource
    - LicenseDocument
    - LinguisticSystem
    - MediaType
    - MediaTypeOrExtent
    - PeriodOfTime
    - Plan
    - Policy
    - ProvenanceStatement
    - QualitativeAttribute
    - QuantitativeAttribute
    - Resource
    - RightsStatement
    - Role
    - Standard
    - SupportiveEntity
    - Surrounding
    - TimeInstant
    range: string
  description:
    name: description
    description: The slot to provide a description for the Entity.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:description
    alias: description
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Any
    - Attribution
    - Catalogue
    - CatalogueRecord
    - ChecksumAlgorithm
    - Concept
    - ConceptScheme
    - DataService
    - Dataset
    - DatasetSeries
    - Distribution
    - Document
    - Entity
    - Frequency
    - Geometry
    - Identifier
    - LegalResource
    - LicenseDocument
    - LinguisticSystem
    - MediaType
    - MediaTypeOrExtent
    - PeriodOfTime
    - Plan
    - Policy
    - ProvenanceStatement
    - QualitativeAttribute
    - QuantitativeAttribute
    - Resource
    - RightsStatement
    - Role
    - Standard
    - SupportiveEntity
    - Surrounding
    - TimeInstant
    range: string
  id:
    name: id
    description: A slot to provide an URI for an entity within this schema.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    identifier: true
    alias: id
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Dataset
    - DefinedTerm
    - Document
    - Entity
    - LegalResource
    - LicenseDocument
    - Resource
    range: uriorcurie
    required: true
  other_identifier:
    name: other_identifier
    description: A slot to provide a secondary identifier of the Entity.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: adms:identifier
    alias: other_identifier
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Dataset
    - Entity
    range: Identifier
    required: false
    multivalued: true
    inlined_as_list: true
  has_qualitative_attribute:
    name: has_qualitative_attribute
    description: The slot to relate a qualitative attribute to an EvaluatedEntity,
      EvaluatedActivity or AgenticEntity
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:relation
    alias: has_qualitative_attribute
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    range: QualitativeAttribute
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_quantitative_attribute:
    name: has_quantitative_attribute
    description: The slot to relate a quantitative attribute to an EvaluatedEntity,
      EvaluatedActivity or AgenticEntity
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:relation
    alias: has_quantitative_attribute
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    range: QuantitativeAttribute
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_part:
    name: has_part
    description: A slot to provide a part of the Entity.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:hasPart
    alias: has_part
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Catalogue
    - Entity
    range: Entity
    multivalued: true
    inlined_as_list: true
  part_of:
    name: part_of
    description: The slot to specify an Entity of which the Entity is a part.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:isPartOf
    alias: part_of
    owner: Atom
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    inverse: has_part
    range: Entity
    multivalued: true
    inlined_as_list: true
  type:
    name: type
    description: This slot is described in more detail within the class in which it
      is used.
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: dcterms:type
    alias: type
    owner: Atom
    domain_of:
    - Agent
    - ClassifierMixin
    - Dataset
    - LicenseDocument
    range: DefinedTerm
    inlined: true
  rdf_type:
    name: rdf_type
    description: The slot to provide the Atom as a ChEBI ID from the atom (CHEBI:33250)
      branch.
    in_subset:
    - domain_agnostic_core
    from_schema: https://w3id.org/nfdi4cat/coremeta4cat
    rank: 1000
    slot_uri: rdf:type
    alias: rdf_type
    owner: Atom
    domain_of:
    - ClassifierMixin
    range: DefinedTerm
    required: true
    recommended: true
    inlined: true
class_uri: CHEBI:33250